ExploreMetabar : a user-friendly Shiny application to explore the drivers of microbial communities
Résumé
A free and easily accessible web application ; R package for local installation ; Use of phyloseq object (output from rANOMALY, FROGS) ; Interactive filters, to focus on a specific group of samples. Complete diversity analysis with advanced visualizations and statistical tests, differential analysis and more features. Metabarcoding is widely used for community composition studies of complex samples (food, gut, environement) ; Existing tools for the analysis of these data needs some coding knowledge. We present a Shiny application for metabarcoding data with interactive features allowing user to explore and analyse them.
Domaines
Ecologie, Environnement
Origine : Fichiers produits par l'(les) auteur(s)