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authFullName_s : Jonathan Colombet
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Occurrence and Seasonal Dynamics of ALNs in Freshwater Lakes Are Influenced by Their Biological Environment

Maxime Fuster , Hermine Billard , Gisèle Bronner , Télesphore Sime-Ngando , Jonathan Colombet et al.
Microbial ecology, In press, ⟨10.1007/s00248-022-01974-1⟩
Journal articles hal-03936443v1
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Honeybee Conservation centers in Western Europe: an innovative strategy using sustainable beekeeping to reduce honeybee decline

Miguel Vilas Boas , Maria Alice Pinto , Catia Neves , Lionel Garnery , Hélène Legout et al.
44. Apimondia congress, Sep 2015, Daejon, South Korea. 2015
Conference poster hal-01216261v1
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Diversity and comparative genomics of Microviridae in Sphagnum-dominated peatlands

Achim Quaiser , Alexis Dufresne , Flore Ballaud , Simon Roux , Yvan Zivanovic et al.
Frontiers in Microbiology, 2015, 6, pp.375. ⟨10.3389/fmicb.2015.00375⟩
Journal articles hal-01149546v1

Viral Regulation of Prokaryotic Carbon Metabolism in a Hypereutrophic Freshwater Reservoir Ecosystem (Villerest, France)

Angia Sriram Pradeep Ram , Jonathan Colombet , Fanny Perrière , Antoine Thouvenot , Télesphore Sime-Ngando et al.
Frontiers in Microbiology, 2016, 7, ⟨10.3389/fmicb.2016.00081⟩
Journal articles hal-01623641v1

Virioplankton distribution and activity in a tropical eutrophicated bay

Yvan Bettarel , Robert Arfi , Thierry Bouvier , Marc Bouvy , Briand Enora et al.
Estuarine, Coastal and Shelf Science, 2008, 80 (3), pp.425-429
Journal articles hal-00526253v1

Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat.

Guillaume Borrel , Jonathan Colombet , Agnès Robin , Anne-Catherine Lehours , David Prangishvili et al.
ISME Journal, 2012, 6 (11), pp.2119-27. ⟨10.1038/ismej.2012.49⟩
Journal articles hal-00819247v1

Genotypic, size and morphological diversity of virioplankton in a deep oligomesotrophic freshwater lake (Lac Pavin, France)

Jonathan Colombet , Agnès Robin , Télesphore Sime-Ngando
Journal of Environmental Sciences, 2017, 53, pp.48 - 59. ⟨10.1016/j.jes.2016.05.016⟩
Journal articles hal-01624034v1

A Double Staining Method Using SYTOX Green and Calcofluor White for Studying Fungal Parasites of Phytoplankton.

Mélanie Gerphagnon , Delphine Latour , Jonathan Colombet , Télesphore Sime-Ngando
Applied and Environmental Microbiology, 2013, 79 (13), pp.3943-51. ⟨10.1128/AEM.00696-13⟩
Journal articles hal-00846159v1

Diversity of virus-host systems in hypersaline Lake Retba, Senegal.

Télesphore Sime-Ngando , Soizick Lucas , Agnès Robin , Kimberly Pause Tucker , Jonathan Colombet et al.
Environmental Microbiology, 2010, 13 (8), epub ahead of print. ⟨10.1111/j.1462-2920.2010.02323.x⟩
Journal articles istex hal-00527107v1
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Top‐Down Controls of Bacterial Metabolism: A Case Study from a Temperate Freshwater Lake Ecosystem

Angia Sriram Pradeep Ram , Marie-Eve Mauduit , Jonathan Colombet , Fanny Perriere , Antoine Thouvenot et al.
Microorganisms, 2022, 7 (2), pp.715. ⟨10.3390/microorganisms10040715⟩
Journal articles hal-03865107v1

Unveiling Crucivirus Diversity by Mining Metagenomic Data

Ignacio de La Higuera , George Kasun , Ellis Torrance , Alyssa Pratt , Amberlee Maluenda et al.
mBio, 2020, 11 (5), ⟨10.1128/mBio.01410-20⟩
Journal articles hal-02996209v1

Integrated characterization of groundwater contamination in an alluvial system. Case study of Allier alluvial aquifer (Massif Central, France).

Nabaz Mohammed , Hélène Celle-Jeanton , Isabelle Batisson , Corinne Bardot , Jonathan Colombet et al.
EGU General Assembly 2013, 2013, Vienna, Austria
Conference papers hal-00803038v1
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Vincent Breton , Elisabeth Allain , Pradeep Angia Siriam Ram , Céline Bailly , Lory-Anne Baker et al.
ICHLERA, Jun 2022, Strasbourg, France. ⟨10.1093/rpd/nc0000⟩
Conference papers hal-03872622v1

Top-Down Controls of Bacterial Metabolism: A Case Study from a Temperate Freshwater Lake Ecosystem

Angia Sriram Pradeep Ram , Marie-Eve Mauduit , Jonathan Colombet , Fanny Perriere , Antoine Thouvenot et al.
Microorganisms, 2022, 10 (4), pp.715. ⟨10.3390/microorganisms10040715⟩
Journal articles hal-03844254v1
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Trophic conditions influence widespread distribution of Aster-Like nanoparticles within aquatic environments

Maxime Fuster , Hermine H. Billard , Marie Mandart , Johannes Steiger , Telesphore Sime-Ngando et al.
Microbial ecology, 2020, 80 (4), pp.741-745. ⟨10.1007/s00248-020-01541-6⟩
Journal articles hal-03084202v1

Monitoring human enteric viruses in wastewater and relevance to infections encountered in the clinical setting: a one-year experiment in central France, 2014 to 2015

Maxime Bisseux , Jonathan Colombet , Audrey Mirand , Anne-Marie Roque-Afonso , Florence Legrand-Abravanel et al.
Eurosurveillance, 2018, 23 (7), ⟨10.2807/1560-7917.ES.2018.23.7.17-00237⟩
Journal articles hal-01734503v1

Differential impact of lytic viruses on the taxonomical resolution of freshwater bacterioplankton community structure

Jitendra Keshri , Angia Sriram Pradeep Ram , Jonathan Colombet , Fanny Perrière , Antoine Thouvenot et al.
Water Research, 2017, 124, pp.129 - 138. ⟨10.1016/j.watres.2017.07.053⟩
Journal articles hal-01624070v1
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Diversity and Structure of the Prokaryotic Communities Indigenous to Two Volcanic Lakes: Nyos and Monoun in Cameroon

Paul-Alain Nana , Moïse Nola , Geneviève Bricheux , Zéphyrin Fokam , Pierre Ngassam et al.
Open Journal of Ecology, 2020, 10 (09), pp.632-650. ⟨10.4236/oje.2020.109039⟩
Journal articles hal-02996331v1
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Contrasting pelagic ecosystem functioning in eastern and western Baffin Bay revealed by trophic network modeling

Blanche Saint-Béat , Brian D Fath , Cyril Aubry , Jonathan Colombet , Julie Dinasquet et al.
Elementa: Science of the Anthropocene, 2020, 8, ⟨10.1525/elementa.397⟩
Journal articles hal-03095448v1
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A New Freshwater Cyanosiphovirus Harboring Integrase

Kevin Xu Zhong , Curtis A. Suttle , Anne-Claire Baudoux , Evelyne Derelle , Jonathan Colombet et al.
Frontiers in Microbiology, 2018, 9, pp.2204. ⟨10.3389/fmicb.2018.02204⟩
Journal articles hal-01884603v1
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Importance de la variabilité verticale dans un lac méromictique profond: diversité et activité lysogène des communautés virales

Jonathan Colombet
Biodiversité et Ecologie. Université Blaise Pascal - Clermont-Ferrand II; Université d'Auvergne - Clermont-Ferrand I, 2008. Français. ⟨NNT : ⟩
Theses tel-00730192v1
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Seasonal Depth-Related Gradients in Virioplankton: Lytic Activity and Comparison with Protistan Grazing Potential in Lake Pavin (France)

Jonathan Colombet , Télesphore Sime-Ngando
Journal articles hal-00787061v1
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Discovery of High Abundances of Aster-Like Nanoparticles in Pelagic Environments: Characterization and Dynamics

Jonathan Colombet , Hermine Billard , Bernard Viguès , Stephanie Balor , Christelle Boulé et al.
Frontiers in Microbiology, 2019, 10, ⟨10.3389/fmicb.2019.02376⟩
Journal articles hal-02317473v1

Short term variations in abundances and potential activities of viruses, bacteria and nanoprotists in Lake Bourget

Télesphore Sime-Ngando , Jonathan Colombet , Sébastien Personnic , Isabelle Domaizon , Ursula Dorigo et al.
Ecological Research, 2008, 23, pp.851-861
Journal articles hal-02656091v1
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Assessing the diversity and specificity of two freshwater viral communities through metagenomics.

Simon Roux , François Enault , Agnès Robin , Viviane Ravet , Sébastien Personnic et al.
PLoS ONE, 2012, 7 (3), pp.e33641. ⟨10.1371/journal.pone.0033641⟩
Journal articles hal-00819334v1
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Influence de la radioactivité naturellement renforcée (NOR) sur les peuplements de diatomées actuelles et passées des sources minérales.

Lory-Anne Baker , Beauger Aude , Sofia Kolovi , Olivier Voldoire , Alain Elisabeth et al.
5e colloque des Zones Ateliers – CNRS 2000-2020, 20 ans de recherche du Réseau des Zones Ateliers, Nov 2020, Tours, France
Conference poster hal-03018019v1

Patterns of viral and microbial diversity in Sphagnum-dominated peatland using meta genomics

Flore Ballaud , Alexis Dufresne , Andre-Jean Francez , Jonathan Colombet , Télesphore Sime-Ngando et al.
VIème Colloque AFEM “Microbiologie environnementale : du gène à l’écosystème”, Association Francophone d’Ecologie Microbienne, Oct 2013, Clermont-Ferrand, France
Conference papers hal-01156599v1

Virus et prophages dans les écosystèmes aquatiques

Télesphore Sime-Ngando , Jonathan Colombet
Canadian Journal of Microbiology, 2009, 55 (2), pp.95-109. ⟨10.1139/w08-099⟩
Journal articles hal-00529979v1
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Soil carbon dioxide emissions controlled by an extracellular oxidative metabolism identifiable by its isotope signature

Benoit Keraval , Anne Catherine Lehours , Jonathan Colombet , Christian Amblard , Gaël Alvarez et al.
Biogeosciences, 2016, 13 (22), pp.6353 - 6362. ⟨10.5194/bg-13-6353-2016⟩
Journal articles hal-01595310v1

Variations in abundance, genome size, morphology, and functional role of the virioplankton in lakes Annecy and Bourget over a 1-year period

Xu Zhong , Pradeep Ram Angia Siram , Jonathan Colombet , Stéphan Jacquet
Microbial ecology, 2014, 67 (1), pp.66-82. ⟨10.1007/s00248-013-0320-2⟩
Journal articles hal-02632925v1