Toward a French cyber Galaxy ? - Unité de Nutrition Humaine Accéder directement au contenu
Poster De Conférence Année : 2013

Toward a French cyber Galaxy ?

Wilfrid Carré
  • Fonction : Auteur
  • PersonId : 834354
Alexandre Cormier
  • Fonction : Auteur
  • PersonId : 977150
Franck Giacomoni
Gildas Le Corguillé
  • Fonction : Auteur
  • PersonId : 881105
Alban Lermine
  • Fonction : Auteur
  • PersonId : 1029712
Sarah Maman Haddad
Pierre Pericard

Résumé

The success of the open web based platform “Galaxy” is growing among scientific communities. The French Institute of Bioinformatics (IFB) wishes to initiate a collaborative work dedicated to scientific workflows and especially to the Galaxy platform. We report here the main items on which future collaborations could be build: (i) software and hardware architecture, (ii) tools integration and (iii) training. High throughput technologies advent significantly alters analysis behaviour and strategy with mobilization of new infrastructure, new tools and new skills. IFB decided to conduct a cross action on "workflows" data analysis solutions, and especially on the Galaxy platform. The first item called "software and hardware architecture" addresses the operational issues in production environments, the potential for automating deployment tasks and the monitoring solutions for Galaxy servers. With the second one, "Tools integration" we aim to provide processes facilitating tool interfacing in a Galaxy instance. Priority will be the development of a good practice guide, as well as a technology watch around the methods proposed by the international community. We also want to promote the sharing of training activities at national level (such as the Aviesan Bioinformatics school, January 2013 - http://galaxy-ecole.sb-roscoff.fr/) and ensure a smooth transition to new uses, such as E-learning. A first working group is already effective. Previous items will be improved in the coming months thanks to a specific dedicated wiki and the first French Galaxy Workshop this autumn.
Fichier principal
Vignette du fichier
Postersgalaxy_1.html (102.2 Ko) Télécharger le fichier
Agenda des formations_3 (290.36 Ko) Télécharger le fichier
Poster_2 (1.6 Mo) Télécharger le fichier
Origine : Fichiers produits par l'(les) auteur(s)
Origine : Fichiers produits par l'(les) auteur(s)
Origine : Fichiers produits par l'(les) auteur(s)

Dates et versions

hal-02748274 , version 1 (03-06-2020)

Identifiants

  • HAL Id : hal-02748274 , version 1
  • PRODINRA : 194077

Citer

Christophe C. Caron, Wilfrid Carré, Alexandre Cormier, Sandra S. Derozier, Franck Giacomoni, et al.. Toward a French cyber Galaxy ?. Galaxy Community Conference, Jun 2013, Oslo, Norway. 2013, Galaxy Community Conference 2013 : Posters / Abstracts. ⟨hal-02748274⟩
23 Consultations
3 Téléchargements

Partager

Gmail Facebook X LinkedIn More